{% extends "app/entries/entry.html" %}

{% block title %}
    {{ gene }}
{% endblock title %}

{% block structured_data %}
    {% load bioschemas %}
    {% bioschemas_gene gene %}
{% endblock structured_data %}

{% block content %}
    <h1 class="h3 text-break">{{ gene }}</h1>
    <div class="row pt-2">
        <div class="col-md-4">
            <p>
                <b>Description:</b> {{ gene.description|default:'No description available.'|safe }}
            </p>

            <hr />

            <p>{{ gene.species.get_named_html_link }}</p>

            <h2 class="h4">Datasets</h2>
            <ul class="list-unstyled">
                {% load entry_links %}
                {% for dataset in gene.species.datasets.all %}
                    <li>{% dataset_gene_link dataset gene %}</li>
                {% endfor %}
            </ul>
        </div>

        <div class="col-md-8">
            <h2 class="h4">Orthogroups</h2>

            <p>
                {% if gene.orthogroups.all %}
                    {{ gene.get_orthogroup_html_links }}
                {% else %}
                    No orthogroups.
                {% endif %}
            </p>

            <h2 class="h4">Gene lists</h2>

            {% if gene.genelists.all %}
                <table class="table table-sm table-striped">
                    <thead>
                        <tr>
                            <th>List name</th>
                            <th>Description</th>
                        </tr>
                    </thead>
                    <tbody>
                        {% load entry_links %}
                        {% for list in gene.genelists.all %}
                            <tr>
                                <td>{% get_genelist_link_by_species list gene.species %}</td>
                                <td>{{ list.description|default:"—" }}</td>
                            </tr>
                        {% endfor %}
                    </tbody>
                </table>
            {% else %}
                <p>No gene lists.</p>
            {% endif %}

            <h2 class="h4">Gene modules</h2>

            {% if gene.modules.all %}
                <table class="table table-sm table-striped">
                    <thead>
                        <tr>
                            <th>Dataset</th>
                            <th>Module</th>
                            <th>Membership score</th>
                        </tr>
                    </thead>
                    <tbody>
                        {% for member in gene.modules.all %}
                            <tr>
                                <td>{% dataset_gene_link member.module.dataset gene %}</td>
                                <td>{{ member.module.get_html_link }}</td>
                                <td>{{ member.membership_score }}</td>
                            </tr>
                        {% endfor %}
                    </tbody>
                </table>
            {% else %}
                <p>No gene modules.</p>
            {% endif %}

            <h2 class="h4">Protein domains</h2>

            {% if gene.domains.all %}
                <table class="table table-sm table-striped">
                    <thead>
                        <tr>
                            <th>Domain</th>
                        </tr>
                    </thead>
                    <tbody>
                        {% for domain in gene.domains.all %}
                            <tr>
                                <td>{{ domain.get_html_link }}</td>
                            </tr>
                        {% endfor %}
                    </tbody>
                </table>
            {% else %}
                <p>No protein domains.</p>
            {% endif %}
        </div>
    </div>

{% endblock content %}