PhasorPy
Published January 30, 2025 | Version v0.4
Software Open

phasorpy/phasorpy: v0.4

Creators

  • 1. Institut Pasteur de Montevideo
  • 2. Universidad de la República Facultad de Medicina
  • 3. Pasteur Institute of Montevideo

Description

PhasorPy is an open-source Python library for the analysis of fluorescence lifetime and hyperspectral images using the phasor approach.

This is the fourth alpha release of the PhasorPy library. It contains several bug fixes and many improvements, mostly to the phasorpy.io module. File reader functions are now named signal_from_* or phasor_from_* and have a more consistent API. Point mode PTU files, LIF files containing phasor coordinates or hyperspectral signals, and FLIM LABS JSON files are supported. PhasorPy releases are now available on conda-forge. This release supports Python 3.10 to 3.13.

What's Changed

  • Bump version by @cgohlke in https://github.com/phasorpy/phasorpy/pull/163
  • Support labelled signal axes by @cgohlke in https://github.com/phasorpy/phasorpy/pull/166
  • Update copyright year by @cgohlke in https://github.com/phasorpy/phasorpy/pull/168
  • Return array coordinates from files in normal units by @cgohlke in https://github.com/phasorpy/phasorpy/pull/169
  • Document availability on conda-forge by @cgohlke in https://github.com/phasorpy/phasorpy/pull/170
  • Fix RST code is two backticks by @cgohlke in https://github.com/phasorpy/phasorpy/pull/171
  • Support reading point mode PTU files by @cgohlke in https://github.com/phasorpy/phasorpy/pull/172
  • Fix phasor_calibrate for handling higher harmonics than size of first dimension of reference_real by @bruno-pannunzio in https://github.com/phasorpy/phasorpy/pull/176
  • Improve io module by @cgohlke in https://github.com/phasorpy/phasorpy/pull/177
  • Add support for Leica LIF files by @cgohlke in https://github.com/phasorpy/phasorpy/pull/178
  • Add support for new FLIM LABS JSON format by @cgohlke in https://github.com/phasorpy/phasorpy/pull/179
  • Reformat with black 25.1 by @cgohlke in https://github.com/phasorpy/phasorpy/pull/180
  • Release v0.4 by @cgohlke in https://github.com/phasorpy/phasorpy/pull/181
  • Fixes for liffile 2025.1.30 by @cgohlke in https://github.com/phasorpy/phasorpy/pull/182

Full Changelog: https://github.com/phasorpy/phasorpy/compare/v0.3...v0.4

Files

phasorpy/phasorpy-v0.4.zip

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Additional details

Related works

Is supplement to
Software: https://github.com/phasorpy/phasorpy/tree/v0.4 (URL)

Software

Repository URL
https://github.com/phasorpy/phasorpy
Programming language
Python, Cython